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Services tagged with "prediction"

results 1 to 10 of 14

 
  • GlimmermService  

    by vt.edu
    United States
    Wraps the GlimmerM program, from The Institute for Genomic Research (TIGR), for doing gene prediction for eukaryotic genomic DNA sequences. see: http:... (community description)
    Tags:
    • bioinformatics,
    • exon,
    • prediction,
    • eukaryotic,
    • gene model,
    • genome,
    • gene,
    • splice site,
    • sequence,
    • DNA,
    • university
  • TfscanService  

    by vt.edu
    United States
    Wraps the tfscan transcription factor binding site prediction program from the EMBOSS suite. The TRANSFAC Database is a database of eukaryotic cis-ac... (community description)
    Tags:
    • regulatory,
    • cis-acting,
    • insect,
    • TRANSFAC,
    • vertebrates,
    • element,
    • trans-acting factor,
    • university,
    • wrapping,
    • prediction,
    • suite,
    • list,
    • yeast,
    • sequence,
    • protein,
    • plant,
    • organism,
    • matching,
    • taxonomic group,
    • human,
    • fungi,
    • database,
    • eukaryotic,
    • binding site,
    • bioinformatics,
    • DNA,
    • EMBOSS,
    • free,
    • transcription factor,
    • EMBOSS suite,
    • tfscan
  • GrailexpService  

    by vt.edu
    United States
    Wraps PERCEVAL application (Protein-coding exon, repetitive, and CpG-Island Evaluator) contained within the GrailEXP gene discovery suite for doing g... (community description)
    Tags:
    • neural network,
    • protein-coding exon,
    • bioinformatics,
    • exon,
    • genome,
    • CpG-Island Evaluator,
    • PERCEVAL,
    • prediction,
    • free,
    • DAS/1,
    • list,
    • registration,
    • restricted,
    • gene discovery suite,
    • DNA,
    • GrailEXP,
    • repetitive,
    • network,
    • sequence,
    • university
  • GenemarkpatricServic...  

    by vt.edu
    United States
    GeneMark is a family of gene prediction programs provided by Mark Borodovsky's Bioinformatics Group at the Georgia Institute of Technology. It predict... (community description)
    Tags:
    • restricted,
    • prokaryotic,
    • gene,
    • sequence,
    • non-coding,
    • eukaryotic,
    • prediction,
    • genome,
    • DNA,
    • free,
    • region,
    • coding,
    • intergenic,
    • university,
    • DAS/1,
    • intergenic region,
    • bioinformatics,
    • Hidden Markov model
  • TicoService  

    by vt.edu
    United States
    Tico web service wraps up TiCo package, "a tool for postprocessing predictions of prokaryotic genes with the objective to improve the accuracy of anno... (community description)
    Tags:
    • postprocessing,
    • improvement,
    • bioinformatics,
    • prokaryotic,
    • gene,
    • threshold,
    • free,
    • tool,
    • annotation,
    • prediction,
    • accuracy,
    • translation,
    • university
  • LipopService  

    by vt.edu
    United States
    Lipop Webservice is for prediction of lipoproteins and for discriminating between lipoprotein signalpetides, other signal peptides and n-terminal memb... (community description)
    Tags:
    • bacteria,
    • free,
    • bioinformatics,
    • prediction,
    • membrane,
    • signal peptide,
    • discrimination,
    • lipoprotein,
    • university,
    • helix
  • PredictionsService  

    by noaa.gov
    United States
    Forecast service for a certain station. see: http://opendap.co-ops.nos.noaa.gov/axis/ (community description)
    Tags:
    • metorology,
    • _unkown,
    • _government,
    • prediction,
    • government,
    • free,
    • forecast,
    • station,
    • department,
    • USA
  • GenscanService  

    by vt.edu
    United States
    Wraps the GENSCAN program for doing gene prediction. It analyzes genomic DNA sequences from a variety of organisms including humans and other vertebr... (community description)
    Tags:
    • size,
    • model parameter,
    • restricted,
    • invertebrate,
    • gene,
    • bioinformatics,
    • vertebrate,
    • splice site,
    • TATA box,
    • GENSCAN,
    • exon,
    • sequence,
    • free,
    • property,
    • human,
    • structure,
    • university,
    • analysis,
    • plant,
    • DAS/1,
    • DNA,
    • prediction,
    • probabilistic model,
    • organism,
    • genome,
    • density,
    • region
  • MemsatService  

    by vt.edu
    United States
    Memsat Webservice is for prediction of secondary structure and topology of all-helix integral membrane proteins based on the recognition of topologica... (community description)
    Tags:
    • prediction,
    • topological model,
    • secondary structure,
    • all-helix integral membrane,
    • topology,
    • model,
    • free,
    • protein,
    • bioinformatics,
    • recognition,
    • university
  • GlimmerService  

    by vt.edu
    United States
    Wraps the Glimmer 2.10 program, from The Institute for Genomic Research (TIGR), for doing gene prediction in genomic DNA sequences, especially the ge... (community description)
    Tags:
    • overlapping,
    • putative,
    • Markov model,
    • bioinformatics,
    • sequence,
    • identification,
    • genome,
    • gene,
    • partial open reading frame,
    • coding,
    • archaea,
    • free,
    • non-coding,
    • bacteria,
    • archea,
    • region,
    • conflict,
    • DAS/1,
    • interpolation,
    • DNA,
    • university,
    • open reading frame,
    • registration,
    • markov model,
    • overlap,
    • prediction,
    • coding region
 
 
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